STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM21315.1Alpha-1,2-mannosidase, putative. (797 aa)    
Predicted Functional Partners:
SEM37929.1
Hypothetical protein.
     0.760
SEM37820.1
alpha-L-fucosidase.
 
   
 0.720
SEM38463.1
Hexosaminidase.
 
     0.709
SEM38021.1
Hexosaminidase.
 
     0.707
SEK94871.1
Hexosaminidase.
 
     0.644
SEM21285.1
Alpha-1,2-mannosidase, putative.
 
    
0.609
SEM11870.1
Beta-L-arabinofuranosidase, GH127.
  
     0.527
SEL75128.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
  
     0.512
SEM37992.1
Beta-mannosidase.
 
     0.508
SEM14749.1
Alpha galactosidase A.
  
     0.485
Your Current Organism:
Pseudoxanthomonas sp. GM95
NCBI taxonomy Id: 1881043
Other names: P. sp. GM95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.