STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26572.1Carbamoyl-phosphate synthase large subunit. (1081 aa)    
Predicted Functional Partners:
SFV26576.1
Carbamoyl-phosphate synthase small subunit.
 0.999
SFV35123.1
Aspartate carbamoyltransferase.
 
 0.999
SFV27273.1
Dihydroorotase.
 0.997
SFV27247.1
Argininosuccinate synthase.
 
 
 0.996
SFV31840.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.987
SFV27413.1
Dihydroorotate oxidase A.
 
 0.986
SFV28714.1
Amidophosphoribosyltransferase.
 
 
 0.986
SFV27251.1
N-acetylornithine carbamoyltransferase.
 
 
 0.970
SFV33882.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
   
 0.950
SFV32081.1
Orotidine-5'-phosphate decarboxylase.
 
  
 0.948
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.