STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26724.1Multidrug efflux pump. (1057 aa)    
Predicted Functional Partners:
SFV26723.1
Membrane fusion protein, multidrug efflux system.
 
 0.990
SFV34738.1
Membrane fusion protein, multidrug efflux system.
 
 0.963
SFV26717.1
Membrane fusion protein, multidrug efflux system.
  0.958
SFV36465.1
RND family efflux transporter, MFP subunit.
  
  0.941
SFV26266.1
Membrane fusion protein, multidrug efflux system.
  
  0.938
SFV34413.1
Membrane fusion protein, multidrug efflux system.
 
  0.937
SFV30411.1
Membrane fusion protein, multidrug efflux system.
  
  0.921
SFV34197.1
RND family efflux transporter, MFP subunit.
  
  0.898
SFV29311.1
HlyD family secretion protein.
  
  0.884
SFV30712.1
RND family efflux transporter, MFP subunit; Manually curated.
  
  0.880
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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