STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26867.1Transcriptional regulator, ArsR family. (123 aa)    
Predicted Functional Partners:
SFV26870.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.860
SFV26871.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.825
SFV27027.1
Transcriptional regulator, ArsR family.
  
     0.716
SFV26865.1
UPF0176 protein.
 
     0.619
SFV26864.1
Uncharacterized conserved protein YdiU, UPF0061 family.
     
 0.552
SFV26862.1
Glutathione S-transferase.
       0.461
SFV26859.1
Luciferase family oxidoreductase, group 1.
 
     0.426
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.