STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV27417.1UDP-N-acetylmuramate dehydrogenase. (346 aa)    
Predicted Functional Partners:
SFV34877.1
UDP-N-acetylmuramate--L-alanine ligase.
 
 
 0.974
SFV35188.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
 
  
 0.961
SFV35229.1
MurNAc alpha-1-phosphate uridylyltransferase.
    
  0.921
SFV35369.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
  
 0.889
SFV34864.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
 
 
 0.869
SFV34861.1
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
 
 0.859
SFV34873.1
UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase.
 
 
 0.853
SFV30240.1
BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
  
 0.852
SFV34881.1
D-alanine-D-alanine ligase.
 
 
 0.849
SFV27413.1
Dihydroorotate oxidase A.
  
    0.844
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.