STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV29224.1Glucose-fructose oxidoreductase. (375 aa)    
Predicted Functional Partners:
SFV26424.1
Sugar phosphate isomerase/epimerase.
 
 
 0.811
SFV31253.1
Gluconolactonase.
 
 
 0.811
SFV26430.1
Sugar phosphate isomerase/epimerase.
 
 
 0.788
SFV29216.1
Gluconolactonase.
 
 
  0.786
SFV34092.1
UDP-N-acetylglucosamine 2-epimerase/undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase,TIGR02380.
  
 
 0.749
SFV26553.1
lysyl-tRNA synthetase, class II.
  
    0.638
SFV33992.1
Sialate O-acetylesterase.
  
     0.632
SFV35382.1
dTDP-glucose 4,6-dehydratase.
  
 
 0.629
SFV29227.1
2-octaprenyl-6-methoxyphenol hydroxylase.
  
    0.614
SFV29231.1
2-octaprenyl-6-methoxyphenol hydroxylase; Manually curated.
  
    0.614
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.