STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV31467.1Protein of unknown function. (339 aa)    
Predicted Functional Partners:
SFV30493.1
M6 family metalloprotease domain-containing protein.
  
     0.759
SFV30494.1
M6 family metalloprotease domain-containing protein.
  
     0.756
SFV34270.1
Hypothetical protein.
  
     0.753
SFV35666.1
Serine aminopeptidase, S33.
  
     0.715
SFV31817.1
Inhibitor of cysteine peptidase.
  
     0.703
SFV29511.1
Protein of unknown function.
  
     0.689
SFV30381.1
ABC transporter, phosphonate, substrate-binding protein.
  
     0.686
SFV33902.1
Protein of unknown function.
  
     0.674
SFV28086.1
Hypothetical protein.
  
     0.626
SFV36340.1
Hypothetical protein.
  
     0.625
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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