STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV34756.1Large conductance mechanosensitive channel. (133 aa)    
Predicted Functional Partners:
SFV34809.1
6,7-dimethyl-8-ribityllumazine synthase.
  
  
 0.823
SFV29716.1
Methionine adenosyltransferase.
   
    0.735
SFV34760.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.677
SFV34754.1
Zn-dependent amino-or carboxypeptidase, M28 family.
       0.625
SFV34763.1
Hypothetical protein.
       0.559
SFV33499.1
PAS domain S-box-containing protein.
     
 0.546
SFV27839.1
Bacterial nucleoid protein Hbs.
  
  
 0.512
SFV30177.1
Multisubunit potassium/proton antiporter, PhaA subunit /multisubunit potassium/proton antiporter, PhaB subunit.
     
 0.463
SFV33604.1
DNA polymerase I.
     
 0.453
SFV34766.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
       0.453
Your Current Organism:
Pseudoxanthomonas sp. YR558
NCBI taxonomy Id: 1881044
Other names: P. sp. YR558
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.