STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH17190.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (260 aa)    
Predicted Functional Partners:
SHG61244.1
Fengycin family lipopeptide synthetase D.
  
 0.916
SHH53291.1
Bifunctional isochorismate lyase / aryl carrier protein.
  
 
 0.850
SHG61208.1
Amino acid adenylation domain-containing protein.
 
 0.849
SHH18377.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.820
SHG95461.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.787
SHH65541.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.779
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.743
SHG71817.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.731
SHG34816.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.721
SHG60289.1
[acyl-carrier-protein] S-malonyltransferase.
 0.721
Your Current Organism:
Massilia sp. CF038
NCBI taxonomy Id: 1881045
Other names: M. sp. CF038
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.