STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE93824.1Response regulator receiver modulated diguanylate cyclase. (305 aa)    
Predicted Functional Partners:
SDD14799.1
PAS domain S-box-containing protein.
 0.999
SDE89514.1
PAS domain S-box-containing protein.
0.999
SDE93802.1
Signal transduction histidine kinase.
0.999
SDF44382.1
PAS domain S-box-containing protein.
0.999
SDE54320.1
Multi-sensor hybrid histidine kinase.
 0.993
SDC90978.1
Signal transduction histidine kinase.
0.985
SDE00101.1
PAS domain S-box-containing protein.
 0.983
SDE89690.1
GAF sensor hybrid histidine kinase.
  
0.982
SDD66869.1
PAS domain S-box-containing protein.
 0.980
SDD04771.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
0.975
Your Current Organism:
Massilia sp. PDC64
NCBI taxonomy Id: 1881046
Other names: M. sp. PDC64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.