STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH18307.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
SEH18305.1
Autotransporter secretion outer membrane protein TamA.
       0.779
SEH18306.1
Autotransporter secretion inner membrane protein TamB.
       0.779
SEH18308.1
Putative Ca2+/H+ antiporter, TMEM165/GDT1 family.
       0.459
SEH18304.1
UDPglucose 6-dehydrogenase.
       0.453
Your Current Organism:
Sphingopyxis sp. YR583
NCBI taxonomy Id: 1881047
Other names: S. sp. YR583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.