STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH18908.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
SEH18907.1
Hypothetical protein.
       0.773
SEH18910.1
Phosphoserine phosphatase.
   
  0.654
SEH18909.1
Hypothetical protein.
       0.651
cysC
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.643
SEH11624.1
Cytochrome P450.
    
  0.456
SEH15257.1
Cytochrome P450.
    
  0.456
SEH16119.1
Cytochrome P450.
    
  0.456
SEH16793.1
Linalool 8-monooxygenase; Belongs to the cytochrome P450 family.
    
  0.456
SEH16821.1
Cytochrome P450.
    
  0.456
SEH19154.1
Cytochrome P450.
    
  0.456
Your Current Organism:
Sphingopyxis sp. YR583
NCBI taxonomy Id: 1881047
Other names: S. sp. YR583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.