Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEO04901.1 | SEO25585.1 | SAMN05428947_101110 | SAMN05428947_101913 | Aldehyde dehydrogenase (NAD+). | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.931 |
| SEO04901.1 | SEO49445.1 | SAMN05428947_101110 | SAMN05428947_102565 | Aldehyde dehydrogenase (NAD+). | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. | 0.581 |
| SEO04901.1 | SEO49470.1 | SAMN05428947_101110 | SAMN05428947_102566 | Aldehyde dehydrogenase (NAD+). | Succinate dehydrogenase subunit A. | 0.659 |
| SEO04901.1 | SEO63671.1 | SAMN05428947_101110 | SAMN05428947_103213 | Aldehyde dehydrogenase (NAD+). | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.887 |
| SEO04901.1 | SEO71920.1 | SAMN05428947_101110 | SAMN05428947_103535 | Aldehyde dehydrogenase (NAD+). | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.975 |
| SEO04901.1 | SEP34130.1 | SAMN05428947_101110 | SAMN05428947_111165 | Aldehyde dehydrogenase (NAD+). | Citrate synthase; Belongs to the citrate synthase family. | 0.894 |
| SEO04901.1 | SEP37647.1 | SAMN05428947_101110 | SAMN05428947_11311 | Aldehyde dehydrogenase (NAD+). | 2-oxoglutarate dehydrogenase E1 component. | 0.581 |
| SEO04901.1 | ackA | SAMN05428947_101110 | SAMN05428947_108109 | Aldehyde dehydrogenase (NAD+). | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.889 |
| SEO04901.1 | fumC | SAMN05428947_101110 | SAMN05428947_1169 | Aldehyde dehydrogenase (NAD+). | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.647 |
| SEO25585.1 | SEO04901.1 | SAMN05428947_101913 | SAMN05428947_101110 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Aldehyde dehydrogenase (NAD+). | 0.931 |
| SEO25585.1 | SEO49445.1 | SAMN05428947_101913 | SAMN05428947_102565 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. | 0.707 |
| SEO25585.1 | SEO49470.1 | SAMN05428947_101913 | SAMN05428947_102566 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Succinate dehydrogenase subunit A. | 0.606 |
| SEO25585.1 | SEO63671.1 | SAMN05428947_101913 | SAMN05428947_103213 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.931 |
| SEO25585.1 | SEO63689.1 | SAMN05428947_101913 | SAMN05428947_103214 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Hypothetical protein. | 0.578 |
| SEO25585.1 | SEO71920.1 | SAMN05428947_101913 | SAMN05428947_103535 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.991 |
| SEO25585.1 | SEP34130.1 | SAMN05428947_101913 | SAMN05428947_111165 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Citrate synthase; Belongs to the citrate synthase family. | 0.983 |
| SEO25585.1 | ackA | SAMN05428947_101913 | SAMN05428947_108109 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.915 |
| SEO49445.1 | SEO04901.1 | SAMN05428947_102565 | SAMN05428947_101110 | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. | Aldehyde dehydrogenase (NAD+). | 0.581 |
| SEO49445.1 | SEO25585.1 | SAMN05428947_102565 | SAMN05428947_101913 | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.707 |
| SEO49445.1 | SEO49470.1 | SAMN05428947_102565 | SAMN05428947_102566 | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase subunit A. | 0.999 |
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