Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP80305.1 | SEP96569.1 | SAMN05428995_101851 | SAMN05428995_102163 | Cobalamin biosynthetic protein CobC. | Uncharacterized conserved protein, DUF2147 family. | 0.561 |
SEP80305.1 | hisA | SAMN05428995_101851 | SAMN05428995_102162 | Cobalamin biosynthetic protein CobC. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.804 |
SEP80305.1 | hisF | SAMN05428995_101851 | SAMN05428995_102160 | Cobalamin biosynthetic protein CobC. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.867 |
SEP96569.1 | SEP80305.1 | SAMN05428995_102163 | SAMN05428995_101851 | Uncharacterized conserved protein, DUF2147 family. | Cobalamin biosynthetic protein CobC. | 0.561 |
SEP96569.1 | hisA | SAMN05428995_102163 | SAMN05428995_102162 | Uncharacterized conserved protein, DUF2147 family. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.703 |
SEP96569.1 | hisF | SAMN05428995_102163 | SAMN05428995_102160 | Uncharacterized conserved protein, DUF2147 family. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.883 |
hisA | SEP80305.1 | SAMN05428995_102162 | SAMN05428995_101851 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | Cobalamin biosynthetic protein CobC. | 0.804 |
hisA | SEP96569.1 | SAMN05428995_102162 | SAMN05428995_102163 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | Uncharacterized conserved protein, DUF2147 family. | 0.703 |
hisA | hisF | SAMN05428995_102162 | SAMN05428995_102160 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.999 |
hisF | SEP80305.1 | SAMN05428995_102160 | SAMN05428995_101851 | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | Cobalamin biosynthetic protein CobC. | 0.867 |
hisF | SEP96569.1 | SAMN05428995_102160 | SAMN05428995_102163 | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | Uncharacterized conserved protein, DUF2147 family. | 0.883 |
hisF | hisA | SAMN05428995_102160 | SAMN05428995_102162 | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.999 |