STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ60118.1Phage tail assembly chaperone protein, E, or 41 or 14. (95 aa)    
Predicted Functional Partners:
SEQ60197.1
Hypothetical protein.
 
    0.991
SEQ60236.1
P2-like prophage tail protein X.
 
    0.976
SEQ60090.1
Hypothetical protein.
 
    0.962
SEQ60063.1
Hypothetical protein.
 
    0.961
SEQ59830.1
Phage baseplate assembly protein V.
 
    0.945
SEQ59904.1
Phage-related baseplate assembly protein.
 
    0.945
SEQ59776.1
Phage virion morphogenesis (putative tail completion) protein.
 
    0.944
SEQ59874.1
Hypothetical protein.
 
    0.944
SEQ59930.1
Phage tail protein, P2 protein I family.
 
    0.940
SEQ60177.1
Phage tail tape measure protein, TP901 family, core region.
 
    0.933
Your Current Organism:
Loktanella sp. DSM 29012
NCBI taxonomy Id: 1881056
Other names: L. sp. DSM 29012
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