STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase. (483 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.987
SDQ16314.1
L-ribulose 5-phosphate 4-epimerase.
  
 
 0.827
araB
L-ribulokinase.
 
 
 0.818
SDQ45875.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.781
SDQ83630.1
Xylulokinase; Belongs to the FGGY kinase family.
 
  
 
0.761
SDQ23092.1
6-phosphogluconate dehydrogenase (decarboxylating).
  
 
 0.747
SDQ65083.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
 
  
 
0.745
SDQ88125.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.738
SDQ06113.1
Ribose 5-phosphate isomerase B.
    
 0.729
SDQ67999.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.717
Your Current Organism:
Quadrisphaera sp. DSM 44207
NCBI taxonomy Id: 1881057
Other names: Q. sp. DSM 44207
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