STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC98039.1TRAP transporter, DctM subunit. (434 aa)    
Predicted Functional Partners:
SFC98065.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.984
SFC98016.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
  0.974
SFD42921.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
  0.803
SFC55704.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  0.796
SFB81379.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 
  0.780
SFC58242.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
  0.761
SFC01396.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
  0.758
SFD50018.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  0.754
SFC93275.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
  0.748
SFD23026.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
 
  0.732
Your Current Organism:
Bosea sp. DSM 18164
NCBI taxonomy Id: 1881058
Other names: B. sp. DSM 18164
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.