Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKA72869.1 | SKA75293.1 | SAMN05428976_10191 | SAMN05428976_10299 | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.701 |
| SKA72869.1 | SKA75297.1 | SAMN05428976_10191 | SAMN05428976_102100 | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.724 |
| SKA75286.1 | SKA75293.1 | SAMN05428976_10298 | SAMN05428976_10299 | Protein of unknown function. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.784 |
| SKA75286.1 | SKA75297.1 | SAMN05428976_10298 | SAMN05428976_102100 | Protein of unknown function. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.727 |
| SKA75286.1 | SKA75302.1 | SAMN05428976_10298 | SAMN05428976_102101 | Protein of unknown function. | Rod shape-determining protein MreB. | 0.687 |
| SKA75286.1 | SKA75307.1 | SAMN05428976_10298 | SAMN05428976_102102 | Protein of unknown function. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.687 |
| SKA75286.1 | SKA75311.1 | SAMN05428976_10298 | SAMN05428976_102103 | Protein of unknown function. | Rod shape-determining protein MreD. | 0.675 |
| SKA75286.1 | SKA75316.1 | SAMN05428976_10298 | SAMN05428976_102104 | Protein of unknown function. | Penicillin-binding protein 2. | 0.645 |
| SKA75286.1 | minC | SAMN05428976_10298 | SAMN05428976_102105 | Protein of unknown function. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.520 |
| SKA75293.1 | SKA72869.1 | SAMN05428976_10299 | SAMN05428976_10191 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.701 |
| SKA75293.1 | SKA75286.1 | SAMN05428976_10299 | SAMN05428976_10298 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Protein of unknown function. | 0.784 |
| SKA75293.1 | SKA75297.1 | SAMN05428976_10299 | SAMN05428976_102100 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 0.958 |
| SKA75293.1 | SKA75302.1 | SAMN05428976_10299 | SAMN05428976_102101 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreB. | 0.751 |
| SKA75293.1 | SKA75307.1 | SAMN05428976_10299 | SAMN05428976_102102 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.907 |
| SKA75293.1 | SKA75311.1 | SAMN05428976_10299 | SAMN05428976_102103 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreD. | 0.776 |
| SKA75293.1 | SKA75316.1 | SAMN05428976_10299 | SAMN05428976_102104 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Penicillin-binding protein 2. | 0.675 |
| SKA75293.1 | SKA76677.1 | SAMN05428976_10299 | SAMN05428976_102336 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Transcriptional regulator, RpiR family. | 0.761 |
| SKA75293.1 | SKA76979.1 | SAMN05428976_10299 | SAMN05428976_102393 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.768 |
| SKA75293.1 | minC | SAMN05428976_10299 | SAMN05428976_102105 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.683 |
| SKA75297.1 | SKA72869.1 | SAMN05428976_102100 | SAMN05428976_10191 | DNA replication and repair protein RadC; Belongs to the UPF0758 family. | 23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.724 |
page 1 of 4