STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT95860.1malonyl-CoA/methylmalonyl-CoA synthetase. (507 aa)    
Predicted Functional Partners:
SDU46307.1
Amino acid adenylation domain-containing protein.
 
0.999
SDU18686.1
Thioester reductase domain-containing protein.
0.992
SDU02293.1
Acyl transferase domain-containing protein.
 
 0.932
SDU46297.1
Acyl transferase domain-containing protein.
 
 0.893
SDT97713.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
  
 
   0.873
SDT95847.1
malonyl-CoA decarboxylase.
 
  
 0.847
SDT95820.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.837
SDT95834.1
TRAP transporter, DctM subunit.
 
  
  0.820
SDT93970.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.808
SDU33602.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.808
Your Current Organism:
Stappia sp. ES058
NCBI taxonomy Id: 1881061
Other names: S. sp. ES.058, Stappia sp. ES.058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.