STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU03898.14-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (304 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.945
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.925
SDU07070.1
Homoserine dehydrogenase.
  
 
 0.863
SDU34171.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
 
  
 0.811
SDU34184.1
D-amino-acid dehydrogenase.
 
  
  0.704
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
0.682
SDU00271.1
N-acetylglucosamine kinase.
  
 
 0.655
SDU31478.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
  
 0.638
SDU36700.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.629
SDU45314.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
  
  
0.628
Your Current Organism:
Stappia sp. ES058
NCBI taxonomy Id: 1881061
Other names: S. sp. ES.058, Stappia sp. ES.058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.