STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU39075.1Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (177 aa)    
Predicted Functional Partners:
SDU06630.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.715
SDU26157.1
Membrane protease subunit HflC; HflC and HflK could regulate a protease.
  
    0.631
SDU46307.1
Amino acid adenylation domain-containing protein.
  
 
 0.624
SDU39084.1
Pterin-4-alpha-carbinolamine dehydratase.
  
    0.621
cysN
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.610
SDU06692.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.610
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.495
SDU02293.1
Acyl transferase domain-containing protein.
  
 0.486
SDU39062.1
Protein required for attachment to host cells.
       0.482
SDU47561.1
Hypothetical protein.
    
  0.476
Your Current Organism:
Stappia sp. ES058
NCBI taxonomy Id: 1881061
Other names: S. sp. ES.058, Stappia sp. ES.058
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