STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP89258.1Transcriptional regulator, AbrB family. (77 aa)    
Predicted Functional Partners:
SDP89263.1
Hypothetical protein.
 
     0.952
SDP89268.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
       0.497
SDP89253.1
DNA-binding transcriptional regulator, MarR family.
       0.487
nnrE
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...]
   
    0.476
SDP89273.1
Cupin domain-containing protein.
       0.416
Your Current Organism:
Phyllobacterium sp. YR620
NCBI taxonomy Id: 1881066
Other names: P. sp. YR620
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.