STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317Y055Uncharacterized protein. (891 aa)    
Predicted Functional Partners:
A0A317XGK5
SANT domain-containing protein.
    
 0.959
A0A317XUA1
Putative TATA-box-binding factor TBP.
   
 0.959
A0A317XXP5
TPR-like protein.
    
 0.958
A0A317XND3
Uncharacterized protein.
    
 0.953
A0A317XKM3
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.941
A0A317XLE4
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.935
A0A317XUQ2
Uncharacterized protein.
    
 0.911
A0A317XS26
RPOL4c domain-containing protein.
    
 0.907
A0A317XM56
Putative Rpc40-40 kd subunit of DNA-directed RNA polymerases I and III.
    
 0.904
A0A317Y2D2
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.888
Your Current Organism:
Testicularia cyperi
NCBI taxonomy Id: 1882483
Other names: T. cyperi
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