STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO12513.1Catechol 2,3-dioxygenase. (139 aa)    
Predicted Functional Partners:
SDN74412.1
3-methylfumaryl-CoA hydratase.
  
    0.811
SDO89009.1
Aconitate decarboxylase.
 
    0.756
SDP19657.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.751
SDP19732.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
    
 0.751
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.704
SDP07203.1
Biotin-requiring enzyme.
  
 
 0.689
SDO89286.1
2-methylcitrate dehydratase PrpD.
 
    0.675
SDP24525.1
2-methylcitrate dehydratase PrpD.
 
    0.670
SDO13509.1
2-methylcitrate dehydratase PrpD.
 
    0.657
SDO71627.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
 0.656
Your Current Organism:
Afipia sp. GAS231
NCBI taxonomy Id: 1882747
Other names: A. sp. GAS231
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.