STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC24911.1Tripartite-type tricarboxylate transporter, receptor component TctC. (342 aa)    
Predicted Functional Partners:
SEC25007.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
  
  0.784
SEC24959.1
4,5-dihydroxyphthalate decarboxylase.
 
     0.737
SEC84668.1
TctA family transporter.
  
 
  0.645
SEB47027.1
TctA family transporter.
  
 
  0.613
SEB46812.1
Cupin domain-containing protein.
  
     0.559
SEC69039.1
Cupin domain-containing protein.
  
     0.552
SEB66378.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.551
SED00075.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.517
SEC63404.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.512
SED00445.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.505
Your Current Organism:
Beijerinckia sp. 28YEA48
NCBI taxonomy Id: 1882748
Other names: B. sp. 28-YEA-48, Beijerinckia sp. 28-YEA-48
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.