STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO63025.1Cytosine permease. (510 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.770
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
   
    0.752
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
   
    0.722
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
   
    0.682
SIO65406.1
Uracil phosphoribosyltransferase; Belongs to the UPRTase family.
   
  
 0.557
SIO63022.1
Predicted arabinose efflux permease, MFS family.
       0.504
SIO63029.1
Fucose permease.
       0.453
SIO56248.1
PAS domain S-box-containing protein.
    
  0.427
SIO65073.1
Signal transduction histidine kinase.
    
  0.427
SIO18287.1
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
    
  0.424
Your Current Organism:
Singulisphaera sp. GP187
NCBI taxonomy Id: 1882752
Other names: S. sp. GP187
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