STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO66153.1Serine/threonine protein kinase. (1261 aa)    
Predicted Functional Partners:
SIN77973.1
Signal transduction histidine kinase.
  
 0.977
SIN68035.1
PAS domain S-box-containing protein.
   
 0.973
SIO44206.1
PAS domain S-box-containing protein.
   
 0.973
SIO58251.1
PAS domain S-box-containing protein.
 
 
 0.969
SIO66442.1
PAS domain S-box-containing protein.
   
 0.967
SIO56248.1
PAS domain S-box-containing protein.
   
 0.966
SIO60735.1
PAS domain S-box-containing protein.
   
 0.966
SIO62393.1
PAS domain S-box-containing protein.
   
 0.966
SIO65073.1
Signal transduction histidine kinase.
   
 0.966
SIO27945.1
PAS domain S-box-containing protein.
  
 0.964
Your Current Organism:
Singulisphaera sp. GP187
NCBI taxonomy Id: 1882752
Other names: S. sp. GP187
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