STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG51167.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
SHG51198.1
3D (Asp-Asp-Asp) domain-containing protein.
  
    0.780
SHG51225.1
Endodeoxyribonuclease RusA.
       0.773
SHG69124.1
mRNA interferase YafQ.
   
 
 0.743
SHG29744.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
  
 
 0.725
SHG22324.1
D-alanine--poly(phosphoribitol) ligase subunit 2.
 
 
 
 0.701
SHG36884.1
Acyl carrier protein.
   
 
 0.661
SHG33623.1
Bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase.
   
 0.621
SHF82003.1
dTDP-4-amino-4,6-dideoxygalactose transaminase.
  
 0.573
SHF84935.1
Serine O-acetyltransferase.
    
 0.534
SHG51110.1
Hypothetical protein.
 
     0.485
Your Current Organism:
Clostridium sp. DSM 4029
NCBI taxonomy Id: 1882754
Other names: C. sp. DSM 4029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.