STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI09770.1Peptidase family M23. (196 aa)    
Predicted Functional Partners:
SHI11230.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.630
SHI15268.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.607
SHI00883.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.602
SHI25742.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.594
SHI21539.1
Membrane carboxypeptidase (penicillin-binding protein).
  
     0.593
SHH87090.1
Predicted Zn-dependent peptidase.
 
   
 0.489
secF
Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
 
     0.489
mltG-2
UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
   
 0.469
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
  
 0.450
SHH87984.1
GTP pyrophosphokinase.
  
     0.449
Your Current Organism:
Streptomyces sp. 32146
NCBI taxonomy Id: 1882757
Other names: S. sp. 3214.6, Streptomyces sp. 3214.6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.