STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI12944.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
SHI12956.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.940
SHI28363.1
RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.746
SHI19375.1
Anti-anti-sigma factor.
  
     0.706
SHI56125.1
Transcriptional regulator, MarR family.
  
     0.548
SHI18855.1
Peptidoglycan-binding domain-containing protein, expansin.
 
     0.542
SHI11569.1
Hypothetical protein.
  
     0.501
SHI28702.1
Hypothetical protein.
  
     0.498
SHI11480.1
Hypothetical protein; Manually curated.
  
     0.494
SHI39358.1
Hypothetical protein.
  
     0.488
SHI27731.1
Protein of unknown function.
  
     0.486
Your Current Organism:
Streptomyces sp. 32146
NCBI taxonomy Id: 1882757
Other names: S. sp. 3214.6, Streptomyces sp. 3214.6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.