STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI16541.1Hypothetical protein. (83 aa)    
Predicted Functional Partners:
SHI16532.1
Hypothetical protein.
       0.748
SHI16523.1
Mobile element transfer protein.
       0.690
SHI16514.1
Protein of unknown function.
       0.674
SHI16555.1
DNA binding domain-containing protein, excisionase family.
       0.601
SHI16547.1
Hypothetical protein.
       0.594
SHI16563.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.588
SHI16506.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
       0.516
SHI16501.1
Hypothetical protein.
       0.514
SHI16492.1
Transcriptional regulator, GntR family.
       0.402
Your Current Organism:
Streptomyces sp. 32146
NCBI taxonomy Id: 1882757
Other names: S. sp. 3214.6, Streptomyces sp. 3214.6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.