Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG44881.1 | SHH69656.1 | SAMN05444671_0460 | SAMN05444671_3477 | Protein of unknown function. | Putative auto-transporter adhesin, head GIN domain. | 0.471 |
SHG47388.1 | SHH69656.1 | SAMN05444671_0535 | SAMN05444671_3477 | Superfamily II DNA or RNA helicase. | Putative auto-transporter adhesin, head GIN domain. | 0.433 |
SHG56698.1 | SHH69656.1 | SAMN05444671_0822 | SAMN05444671_3477 | Por secretion system C-terminal sorting domain-containing protein. | Putative auto-transporter adhesin, head GIN domain. | 0.418 |
SHH53645.1 | SHH69656.1 | SAMN05444671_3091 | SAMN05444671_3477 | Protein of unknown function. | Putative auto-transporter adhesin, head GIN domain. | 0.461 |
SHH53990.1 | SHH69656.1 | SAMN05444671_3101 | SAMN05444671_3477 | Hypothetical protein. | Putative auto-transporter adhesin, head GIN domain. | 0.438 |
SHH69570.1 | SHH69590.1 | SAMN05444671_3473 | SAMN05444671_3474 | Hypothetical protein. | Transcriptional regulator, PadR family. | 0.529 |
SHH69570.1 | SHH69612.1 | SAMN05444671_3473 | SAMN05444671_3475 | Hypothetical protein. | Phage shock protein C (PspC) family protein. | 0.810 |
SHH69570.1 | SHH69633.1 | SAMN05444671_3473 | SAMN05444671_3476 | Hypothetical protein. | Putative auto-transporter adhesin, head GIN domain. | 0.586 |
SHH69570.1 | SHH69656.1 | SAMN05444671_3473 | SAMN05444671_3477 | Hypothetical protein. | Putative auto-transporter adhesin, head GIN domain. | 0.463 |
SHH69590.1 | SHH69570.1 | SAMN05444671_3474 | SAMN05444671_3473 | Transcriptional regulator, PadR family. | Hypothetical protein. | 0.529 |
SHH69590.1 | SHH69612.1 | SAMN05444671_3474 | SAMN05444671_3475 | Transcriptional regulator, PadR family. | Phage shock protein C (PspC) family protein. | 0.872 |
SHH69590.1 | SHH69633.1 | SAMN05444671_3474 | SAMN05444671_3476 | Transcriptional regulator, PadR family. | Putative auto-transporter adhesin, head GIN domain. | 0.795 |
SHH69590.1 | SHH69656.1 | SAMN05444671_3474 | SAMN05444671_3477 | Transcriptional regulator, PadR family. | Putative auto-transporter adhesin, head GIN domain. | 0.573 |
SHH69612.1 | SHH69570.1 | SAMN05444671_3475 | SAMN05444671_3473 | Phage shock protein C (PspC) family protein. | Hypothetical protein. | 0.810 |
SHH69612.1 | SHH69590.1 | SAMN05444671_3475 | SAMN05444671_3474 | Phage shock protein C (PspC) family protein. | Transcriptional regulator, PadR family. | 0.872 |
SHH69612.1 | SHH69633.1 | SAMN05444671_3475 | SAMN05444671_3476 | Phage shock protein C (PspC) family protein. | Putative auto-transporter adhesin, head GIN domain. | 0.892 |
SHH69612.1 | SHH69656.1 | SAMN05444671_3475 | SAMN05444671_3477 | Phage shock protein C (PspC) family protein. | Putative auto-transporter adhesin, head GIN domain. | 0.627 |
SHH69633.1 | SHH69570.1 | SAMN05444671_3476 | SAMN05444671_3473 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.586 |
SHH69633.1 | SHH69590.1 | SAMN05444671_3476 | SAMN05444671_3474 | Putative auto-transporter adhesin, head GIN domain. | Transcriptional regulator, PadR family. | 0.795 |
SHH69633.1 | SHH69612.1 | SAMN05444671_3476 | SAMN05444671_3475 | Putative auto-transporter adhesin, head GIN domain. | Phage shock protein C (PspC) family protein. | 0.892 |
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