STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH96786.1Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (428 aa)    
Predicted Functional Partners:
SHH84488.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SHH98472.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.930
SHG47053.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.870
SHH84468.1
Glutamate synthase (NADH) small subunit.
  
 0.868
SHH73128.1
Citrate synthase; Belongs to the citrate synthase family.
   
 0.822
SHH82359.1
Acyl transferase domain-containing protein.
    
 0.808
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.799
SHH01882.1
2-oxoglutarate dehydrogenase E1 component.
   
 0.790
SHG72903.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.788
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 
 0.786
Your Current Organism:
Flavobacterium sp. CF108
NCBI taxonomy Id: 1882758
Other names: F. sp. CF108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.