Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM56293.1 | SDM75377.1 | SAMN05443253_10490 | SAMN05443253_105212 | Aldo/keto reductase. | 4-nitrophenyl phosphatase. | 0.752 |
SDM56293.1 | fni | SAMN05443253_10490 | SAMN05443253_103387 | Aldo/keto reductase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.650 |
SDM56293.1 | glpK | SAMN05443253_10490 | SAMN05443253_103332 | Aldo/keto reductase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.724 |
SDM75259.1 | SDM75354.1 | SAMN05443253_105208 | SAMN05443253_105211 | Uncharacterized protein YutD. | Uncharacterized conserved protein YutE, UPF0331/DUF86 family. | 0.619 |
SDM75259.1 | SDM75377.1 | SAMN05443253_105208 | SAMN05443253_105212 | Uncharacterized protein YutD. | 4-nitrophenyl phosphatase. | 0.705 |
SDM75354.1 | SDM75259.1 | SAMN05443253_105211 | SAMN05443253_105208 | Uncharacterized conserved protein YutE, UPF0331/DUF86 family. | Uncharacterized protein YutD. | 0.619 |
SDM75354.1 | SDM75377.1 | SAMN05443253_105211 | SAMN05443253_105212 | Uncharacterized conserved protein YutE, UPF0331/DUF86 family. | 4-nitrophenyl phosphatase. | 0.682 |
SDM75377.1 | SDM56293.1 | SAMN05443253_105212 | SAMN05443253_10490 | 4-nitrophenyl phosphatase. | Aldo/keto reductase. | 0.752 |
SDM75377.1 | SDM75259.1 | SAMN05443253_105212 | SAMN05443253_105208 | 4-nitrophenyl phosphatase. | Uncharacterized protein YutD. | 0.705 |
SDM75377.1 | SDM75354.1 | SAMN05443253_105212 | SAMN05443253_105211 | 4-nitrophenyl phosphatase. | Uncharacterized conserved protein YutE, UPF0331/DUF86 family. | 0.682 |
SDM75377.1 | SDM84116.1 | SAMN05443253_105212 | SAMN05443253_10617 | 4-nitrophenyl phosphatase. | Glycerol dehydrogenase. | 0.726 |
SDM75377.1 | SDN23768.1 | SAMN05443253_105212 | SAMN05443253_109141 | 4-nitrophenyl phosphatase. | Uncharacterized oxidoreductase. | 0.726 |
SDM75377.1 | atpE | SAMN05443253_105212 | SAMN05443253_107191 | 4-nitrophenyl phosphatase. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.671 |
SDM75377.1 | deoD | SAMN05443253_105212 | SAMN05443253_10199 | 4-nitrophenyl phosphatase. | Purine-nucleoside phosphorylase. | 0.680 |
SDM75377.1 | fni | SAMN05443253_105212 | SAMN05443253_103387 | 4-nitrophenyl phosphatase. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.675 |
SDM75377.1 | glpK | SAMN05443253_105212 | SAMN05443253_103332 | 4-nitrophenyl phosphatase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.718 |
SDM75377.1 | guaB | SAMN05443253_105212 | SAMN05443253_1293 | 4-nitrophenyl phosphatase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.762 |
SDM84116.1 | SDM75377.1 | SAMN05443253_10617 | SAMN05443253_105212 | Glycerol dehydrogenase. | 4-nitrophenyl phosphatase. | 0.726 |
SDM84116.1 | glpK | SAMN05443253_10617 | SAMN05443253_103332 | Glycerol dehydrogenase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.647 |
SDN23768.1 | SDM75377.1 | SAMN05443253_109141 | SAMN05443253_105212 | Uncharacterized oxidoreductase. | 4-nitrophenyl phosphatase. | 0.726 |
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