STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN00962.1Prespore-specific regulator. (249 aa)    
Predicted Functional Partners:
SDM14405.1
Stage III sporulation protein AH.
  
  
 0.786
SDM00116.1
Spore coat protein E.
  
     0.774
SDN79002.1
Spore germination protein D.
  
     0.774
SDN81747.1
Outer membrane lipoprotein-sorting protein.
  
     0.773
SDM16504.1
Protein YqhG of unknown function.
  
     0.772
SDN00848.1
Spore germination protein Q; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
  
     0.768
sspI
Small acid-soluble spore protein I (minor); Belongs to the SspI family.
  
     0.766
SDM75166.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
  
     0.766
SDN83852.1
Protein of unknown function.
  
     0.753
SDN84200.1
Stage II sporulation protein E.
  
     0.744
Your Current Organism:
Bacillus sp. OK048
NCBI taxonomy Id: 1882761
Other names: B. sp. OK048
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