Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM00116.1 | SDM14405.1 | SAMN05443253_101427 | SAMN05443253_10245 | Spore coat protein E. | Stage III sporulation protein AH. | 0.814 |
SDM00116.1 | SDM16504.1 | SAMN05443253_101427 | SAMN05443253_102131 | Spore coat protein E. | Protein YqhG of unknown function. | 0.763 |
SDM00116.1 | SDM75166.1 | SAMN05443253_101427 | SAMN05443253_105205 | Spore coat protein E. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.769 |
SDM00116.1 | SDN00848.1 | SAMN05443253_101427 | SAMN05443253_107134 | Spore coat protein E. | Spore germination protein Q; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.918 |
SDM00116.1 | SDN00962.1 | SAMN05443253_101427 | SAMN05443253_107138 | Spore coat protein E. | Prespore-specific regulator. | 0.774 |
SDM00116.1 | SDN79002.1 | SAMN05443253_101427 | SAMN05443253_11971 | Spore coat protein E. | Spore germination protein D. | 0.774 |
SDM00116.1 | SDN81747.1 | SAMN05443253_101427 | SAMN05443253_12055 | Spore coat protein E. | Outer membrane lipoprotein-sorting protein. | 0.774 |
SDM00116.1 | SDN83852.1 | SAMN05443253_101427 | SAMN05443253_12128 | Spore coat protein E. | Protein of unknown function. | 0.740 |
SDM00116.1 | SDN84200.1 | SAMN05443253_101427 | SAMN05443253_12139 | Spore coat protein E. | Stage II sporulation protein E. | 0.735 |
SDM00116.1 | sspI | SAMN05443253_101427 | SAMN05443253_102466 | Spore coat protein E. | Small acid-soluble spore protein I (minor); Belongs to the SspI family. | 0.764 |
SDM14405.1 | SDM00116.1 | SAMN05443253_10245 | SAMN05443253_101427 | Stage III sporulation protein AH. | Spore coat protein E. | 0.814 |
SDM14405.1 | SDM16504.1 | SAMN05443253_10245 | SAMN05443253_102131 | Stage III sporulation protein AH. | Protein YqhG of unknown function. | 0.724 |
SDM14405.1 | SDM75166.1 | SAMN05443253_10245 | SAMN05443253_105205 | Stage III sporulation protein AH. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.724 |
SDM14405.1 | SDN00848.1 | SAMN05443253_10245 | SAMN05443253_107134 | Stage III sporulation protein AH. | Spore germination protein Q; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA. | 0.774 |
SDM14405.1 | SDN00962.1 | SAMN05443253_10245 | SAMN05443253_107138 | Stage III sporulation protein AH. | Prespore-specific regulator. | 0.786 |
SDM14405.1 | SDN79002.1 | SAMN05443253_10245 | SAMN05443253_11971 | Stage III sporulation protein AH. | Spore germination protein D. | 0.755 |
SDM14405.1 | SDN81747.1 | SAMN05443253_10245 | SAMN05443253_12055 | Stage III sporulation protein AH. | Outer membrane lipoprotein-sorting protein. | 0.776 |
SDM14405.1 | SDN83852.1 | SAMN05443253_10245 | SAMN05443253_12128 | Stage III sporulation protein AH. | Protein of unknown function. | 0.454 |
SDM14405.1 | SDN84200.1 | SAMN05443253_10245 | SAMN05443253_12139 | Stage III sporulation protein AH. | Stage II sporulation protein E. | 0.738 |
SDM14405.1 | sspI | SAMN05443253_10245 | SAMN05443253_102466 | Stage III sporulation protein AH. | Small acid-soluble spore protein I (minor); Belongs to the SspI family. | 0.767 |
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