STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN43957.1Probable oxidoreductase, LLM family. (352 aa)    
Predicted Functional Partners:
SDM73764.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
 
 0.827
SDM27360.1
Ferredoxin.
  
 
 0.813
SDM63881.1
Glyoxalase family protein.
  
    0.758
SDM36024.1
NAD(P)H-dependent FMN reductase.
  
 0.685
SDM63629.1
Chromate reductase.
  
 0.685
SDM92699.1
NAD(P)H-dependent FMN reductase.
  
 0.685
SDN15528.1
NAD(P)H-dependent FMN reductase.
  
 0.685
SDN63537.1
NAD(P)H-dependent FMN reductase.
  
 0.685
SDN21690.1
Glyoxylase, beta-lactamase superfamily II.
   
 
 0.684
SDN32844.1
Dihydroorotate oxidase B, catalytic subunit.
    
  0.681
Your Current Organism:
Bacillus sp. OK048
NCBI taxonomy Id: 1882761
Other names: B. sp. OK048
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