STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN58165.1Catechol 2,3-dioxygenase. (283 aa)    
Predicted Functional Partners:
SDL88103.1
Homogentisate 1,2-dioxygenase.
  
 0.907
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
 0.838
SDL95191.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.805
SDL95229.1
methylmalonyl-CoA mutase.
    
 0.805
SDM13673.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.805
SDM13698.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
    
 0.805
SDN58193.1
Predicted dehydrogenase.
       0.773
SDL95126.1
propionyl-CoA carboxylase beta chain.
  
 
 0.710
SDM04219.1
Acetyl-CoA carboxylase, carboxyltransferase component.
  
 
 0.710
SDM13404.1
propionyl-CoA carboxylase beta chain.
  
 
 0.710
Your Current Organism:
Bacillus sp. OK048
NCBI taxonomy Id: 1882761
Other names: B. sp. OK048
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