STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP86788.1Tripartite ATP-independent transporter solute receptor, DctP family. (344 aa)    
Predicted Functional Partners:
SEP86763.1
TRAP transporter, DctM subunit.
 
 0.989
SEQ40300.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
 
 0.888
SER33475.1
TRAP transporter, DctM subunit.
 
 0.887
SEP89297.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.773
SER34553.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.772
SER33453.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.740
SEQ40199.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
  
  0.728
SEQ75057.1
Putative tricarboxylic transport membrane protein.
  
  
  0.703
SEQ40166.1
Putative tricarboxylic transport membrane protein.
  
  
  0.701
SER06305.1
Hypothetical protein.
  
  
 0.693
Your Current Organism:
Arthrobacter sp. OV608
NCBI taxonomy Id: 1882768
Other names: A. sp. OV608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.