STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ60420.1Transcriptional regulator, LacI family. (340 aa)    
Predicted Functional Partners:
SEQ44240.1
Transcriptional regulator, GntR family.
  
     0.719
SEQ69029.1
Glutamate synthase (NADH) large subunit.
    
 
 0.707
SEQ60390.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  
  0.690
SEQ60338.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  
  0.582
SEQ60370.1
Multiple sugar transport system permease protein.
 
  
  0.563
SEQ60444.1
Hypothetical protein.
       0.504
SEQ60477.1
5-methylcytosine-specific restriction enzyme A.
       0.500
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.483
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
   0.483
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.483
Your Current Organism:
Arthrobacter sp. OV608
NCBI taxonomy Id: 1882768
Other names: A. sp. OV608
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.