STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN88259.1Transcriptional regulator, GntR family. (224 aa)    
Predicted Functional Partners:
SDP58666.1
Transcriptional regulator, GntR family.
  
    0.697
SDP25267.1
Transcriptional regulator, GntR family.
  
    0.676
SDP82350.1
Transcriptional regulator, GntR family.
  
    0.639
SDN88301.1
malonyl-CoA decarboxylase.
 
    0.626
SDP26178.1
DNA-binding transcriptional regulator, GntR family.
  
     0.616
SDN88343.1
malonyl-CoA/methylmalonyl-CoA synthetase.
 
     0.519
Your Current Organism:
Phyllobacterium sp. OV277
NCBI taxonomy Id: 1882772
Other names: P. sp. OV277
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.