STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC04744.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (458 aa)    
Predicted Functional Partners:
SDC04815.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.988
SDC04780.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.954
SDD31917.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.900
SDD31954.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.888
SDC04851.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.885
SDC42669.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.854
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 0.854
SDC15813.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.853
SDD61595.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.852
SDD84885.1
Sorbitol ABC transporter membrane protein.
  
 0.852
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.