STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC05278.1Amino acid ABC transporter ATP-binding protein, PAAT family. (255 aa)    
Predicted Functional Partners:
SDC05308.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.996
SDC05349.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.996
SDC05379.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
  0.985
SDE74959.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.964
SDD08988.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  0.955
SDC58414.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.951
SDD08955.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.949
SDC58444.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.947
SDC14896.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  0.943
SDC31345.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  0.941
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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