STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB99335.1Nucleoside-binding protein. (356 aa)    
Predicted Functional Partners:
SDB99366.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.971
SDC29573.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.961
SDB99419.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.955
SDC29628.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
SDD45211.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.954
SDC29598.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.951
SDB99391.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.950
SDC74809.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.949
SDD45170.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.939
SDC74681.1
Nucleoside ABC transporter ATP-binding protein.
 
 
 0.920
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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