STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC12821.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SDE41001.1
Amino acid adenylation domain-containing protein.
 
 0.962
SDD30130.1
Amino acid adenylation domain-containing protein.
 
 
 0.909
SDC52359.1
Acyl carrier protein.
  
 0.827
SDD15347.1
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.814
SDC66793.1
Amino acid adenylation domain-containing protein.
 
 
 0.690
SDC48912.1
Pyruvate dehydrogenase E1 component beta subunit.
  
 
 0.573
SDC12617.1
Ectoine hydroxylase.
 
 
  0.558
SDC25928.1
Catechol 2,3-dioxygenase.
  
 
 0.546
SDC81216.1
Acyl carrier protein.
    
  0.544
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.544
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.