STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC13646.1Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily. (174 aa)    
Predicted Functional Partners:
SDE43323.1
Ribulose 1,5-bisphosphate carboxylase small subunit.
    
 0.952
cbbL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
    
 
 0.931
SDE16035.1
Carbonic anhydrase.
    
 0.930
SDE53175.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.930
SDC13681.1
Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.
       0.746
SDC13603.1
Uncharacterized conserved protein, contains ferritin-like DUF455 domain.
       0.632
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.578
SDD75771.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.547
SDD77756.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.547
SDE82627.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.547
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.