Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC13721.1 | SDC13757.1 | SAMN05444679_101420 | SAMN05444679_101421 | Hypothetical protein. | Hypothetical protein. | 0.752 |
SDC13721.1 | SDC13872.1 | SAMN05444679_101420 | SAMN05444679_101424 | Hypothetical protein. | Uncharacterized conserved protein, DUF1330 family. | 0.639 |
SDC13721.1 | SDC13990.1 | SAMN05444679_101420 | SAMN05444679_101427 | Hypothetical protein. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.458 |
SDC13721.1 | SDC14025.1 | SAMN05444679_101420 | SAMN05444679_101428 | Hypothetical protein. | Hypothetical protein. | 0.458 |
SDC13721.1 | dut | SAMN05444679_101420 | SAMN05444679_101429 | Hypothetical protein. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.401 |
SDC13721.1 | eno | SAMN05444679_101420 | SAMN05444679_101423 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.708 |
SDC13721.1 | ftsB | SAMN05444679_101420 | SAMN05444679_101422 | Hypothetical protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.756 |
SDC13721.1 | kdsA | SAMN05444679_101420 | SAMN05444679_101425 | Hypothetical protein. | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.639 |
SDC13721.1 | pyrG | SAMN05444679_101420 | SAMN05444679_101426 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.639 |
SDC13757.1 | SDC13721.1 | SAMN05444679_101421 | SAMN05444679_101420 | Hypothetical protein. | Hypothetical protein. | 0.752 |
SDC13757.1 | SDC13872.1 | SAMN05444679_101421 | SAMN05444679_101424 | Hypothetical protein. | Uncharacterized conserved protein, DUF1330 family. | 0.665 |
SDC13757.1 | SDC13990.1 | SAMN05444679_101421 | SAMN05444679_101427 | Hypothetical protein. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.473 |
SDC13757.1 | SDC14025.1 | SAMN05444679_101421 | SAMN05444679_101428 | Hypothetical protein. | Hypothetical protein. | 0.469 |
SDC13757.1 | dut | SAMN05444679_101421 | SAMN05444679_101429 | Hypothetical protein. | dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.410 |
SDC13757.1 | eno | SAMN05444679_101421 | SAMN05444679_101423 | Hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.740 |
SDC13757.1 | ftsB | SAMN05444679_101421 | SAMN05444679_101422 | Hypothetical protein. | Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.792 |
SDC13757.1 | kdsA | SAMN05444679_101421 | SAMN05444679_101425 | Hypothetical protein. | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.665 |
SDC13757.1 | pyrG | SAMN05444679_101421 | SAMN05444679_101426 | Hypothetical protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.665 |
SDC13872.1 | SDC13721.1 | SAMN05444679_101424 | SAMN05444679_101420 | Uncharacterized conserved protein, DUF1330 family. | Hypothetical protein. | 0.639 |
SDC13872.1 | SDC13757.1 | SAMN05444679_101424 | SAMN05444679_101421 | Uncharacterized conserved protein, DUF1330 family. | Hypothetical protein. | 0.665 |
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