STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC15467.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (275 aa)    
Predicted Functional Partners:
SDC73832.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.994
SDC73802.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.993
SDD03385.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.985
SDD03342.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.982
SDC15508.1
ABC-type uncharacterized transport system, auxiliary component.
 
  0.969
SDD03481.1
Phospholipid transport system substrate-binding protein.
 
 0.937
SDD03514.1
Phospholipid transport system transporter-binding protein.
  
 0.865
SDD03413.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
     
 0.794
SDC73745.1
Cholesterol transport system auxiliary component.
 
  0.767
SDC64147.1
Hypothetical protein.
  
 0.690
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.