Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC26418.1 | SDC28521.1 | SAMN05444679_10289 | SAMN05444679_102150 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | hydroxymethylglutaryl-CoA lyase. | 0.889 |
SDC26418.1 | SDE82250.1 | SAMN05444679_10289 | SAMN05444679_13323 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.778 |
SDC28521.1 | SDC26418.1 | SAMN05444679_102150 | SAMN05444679_10289 | hydroxymethylglutaryl-CoA lyase. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.889 |
SDC28521.1 | SDC32734.1 | SAMN05444679_102150 | SAMN05444679_102279 | hydroxymethylglutaryl-CoA lyase. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit. | 0.962 |
SDC28521.1 | SDC80867.1 | SAMN05444679_102150 | SAMN05444679_105223 | hydroxymethylglutaryl-CoA lyase. | acetoacetyl-CoA synthetase. | 0.940 |
SDC28521.1 | SDC94124.1 | SAMN05444679_102150 | SAMN05444679_106177 | hydroxymethylglutaryl-CoA lyase. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.856 |
SDC28521.1 | SDE04866.1 | SAMN05444679_102150 | SAMN05444679_116166 | hydroxymethylglutaryl-CoA lyase. | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.916 |
SDC28521.1 | SDE09840.1 | SAMN05444679_102150 | SAMN05444679_11779 | hydroxymethylglutaryl-CoA lyase. | 3-oxoacid CoA-transferase subunit A. | 0.932 |
SDC28521.1 | SDE16643.1 | SAMN05444679_102150 | SAMN05444679_11856 | hydroxymethylglutaryl-CoA lyase. | methylglutaconyl-CoA hydratase. | 0.956 |
SDC28521.1 | SDE41001.1 | SAMN05444679_102150 | SAMN05444679_12211 | hydroxymethylglutaryl-CoA lyase. | Amino acid adenylation domain-containing protein. | 0.886 |
SDC28521.1 | SDE72788.1 | SAMN05444679_102150 | SAMN05444679_12956 | hydroxymethylglutaryl-CoA lyase. | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.889 |
SDC28521.1 | SDE82250.1 | SAMN05444679_102150 | SAMN05444679_13323 | hydroxymethylglutaryl-CoA lyase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.927 |
SDC32734.1 | SDC28521.1 | SAMN05444679_102279 | SAMN05444679_102150 | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit. | hydroxymethylglutaryl-CoA lyase. | 0.962 |
SDC32734.1 | SDC94124.1 | SAMN05444679_102279 | SAMN05444679_106177 | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.799 |
SDC32734.1 | SDE41001.1 | SAMN05444679_102279 | SAMN05444679_12211 | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit. | Amino acid adenylation domain-containing protein. | 0.657 |
SDC80867.1 | SDC28521.1 | SAMN05444679_105223 | SAMN05444679_102150 | acetoacetyl-CoA synthetase. | hydroxymethylglutaryl-CoA lyase. | 0.940 |
SDC80867.1 | SDC94124.1 | SAMN05444679_105223 | SAMN05444679_106177 | acetoacetyl-CoA synthetase. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.744 |
SDC80867.1 | SDE09840.1 | SAMN05444679_105223 | SAMN05444679_11779 | acetoacetyl-CoA synthetase. | 3-oxoacid CoA-transferase subunit A. | 0.931 |
SDC80867.1 | SDE41001.1 | SAMN05444679_105223 | SAMN05444679_12211 | acetoacetyl-CoA synthetase. | Amino acid adenylation domain-containing protein. | 0.938 |
SDC80867.1 | SDE82250.1 | SAMN05444679_105223 | SAMN05444679_13323 | acetoacetyl-CoA synthetase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.871 |
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