STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC34901.1Thioredoxin. (146 aa)    
Predicted Functional Partners:
SDD87624.1
Thioredoxin reductase (NADPH).
  
 0.870
SDD03265.1
Glutamate synthase (NADH) large subunit.
   
 
 0.795
SDC34866.1
tRNA-processing RNAse BN.
  
    0.781
SDC34934.1
NAD(P)H-binding.
  
    0.774
SDD55242.1
Dihydrolipoamide dehydrogenase.
  
 
 0.761
SDD52828.1
Dihydrolipoamide dehydrogenase.
  
 
 0.761
SDD84486.1
Thioredoxin reductase (NADPH).
  
 0.759
SDD91823.1
Thioredoxin reductase (NADPH).
  
 0.759
SDE62638.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.759
SDE74881.1
Glycine/D-amino acid oxidase.
  
 0.759
Your Current Organism:
Variovorax sp. CF079
NCBI taxonomy Id: 1882774
Other names: V. sp. CF079
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.