Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC34521.1 | SDC36695.1 | SAMN05444679_102334 | SAMN05444679_102402 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Vanillate demethylase subunit A. | 0.864 |
SDC34521.1 | SDC36764.1 | SAMN05444679_102334 | SAMN05444679_102404 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Vanillate demethylase subunit B. | 0.780 |
SDC34521.1 | SDC48744.1 | SAMN05444679_102334 | SAMN05444679_103193 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Cytochrome P450. | 0.849 |
SDC34521.1 | SDC93412.1 | SAMN05444679_102334 | SAMN05444679_106153 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.910 |
SDC34521.1 | SDC93992.1 | SAMN05444679_102334 | SAMN05444679_106173 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Cytochrome P450 / NADPH-cytochrome P450 reductase. | 0.996 |
SDC34521.1 | SDD91165.1 | SAMN05444679_102334 | SAMN05444679_11520 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | CDP-4-dehydro-6-deoxyglucose reductase. | 0.839 |
SDC34521.1 | SDE41001.1 | SAMN05444679_102334 | SAMN05444679_12211 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Amino acid adenylation domain-containing protein. | 0.950 |
SDC34521.1 | SDE66517.1 | SAMN05444679_102334 | SAMN05444679_12754 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Phenylpropionate dioxygenase, large terminal subunit. | 0.864 |
SDC34521.1 | SDE66827.1 | SAMN05444679_102334 | SAMN05444679_12763 | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | Phenylpropionate dioxygenase, large terminal subunit. | 0.864 |
SDC36695.1 | SDC34521.1 | SAMN05444679_102402 | SAMN05444679_102334 | Vanillate demethylase subunit A. | ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific). | 0.864 |
SDC36695.1 | SDC36736.1 | SAMN05444679_102402 | SAMN05444679_102403 | Vanillate demethylase subunit A. | GntR family transcriptional regulator, vanillate catabolism transcriptional regulator. | 0.878 |
SDC36695.1 | SDC36764.1 | SAMN05444679_102402 | SAMN05444679_102404 | Vanillate demethylase subunit A. | Vanillate demethylase subunit B. | 0.961 |
SDC36695.1 | SDC48744.1 | SAMN05444679_102402 | SAMN05444679_103193 | Vanillate demethylase subunit A. | Cytochrome P450. | 0.585 |
SDC36695.1 | SDC93992.1 | SAMN05444679_102402 | SAMN05444679_106173 | Vanillate demethylase subunit A. | Cytochrome P450 / NADPH-cytochrome P450 reductase. | 0.548 |
SDC36695.1 | SDD91165.1 | SAMN05444679_102402 | SAMN05444679_11520 | Vanillate demethylase subunit A. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.774 |
SDC36695.1 | SDE41001.1 | SAMN05444679_102402 | SAMN05444679_12211 | Vanillate demethylase subunit A. | Amino acid adenylation domain-containing protein. | 0.631 |
SDC36695.1 | SDE66517.1 | SAMN05444679_102402 | SAMN05444679_12754 | Vanillate demethylase subunit A. | Phenylpropionate dioxygenase, large terminal subunit. | 0.612 |
SDC36695.1 | SDE66827.1 | SAMN05444679_102402 | SAMN05444679_12763 | Vanillate demethylase subunit A. | Phenylpropionate dioxygenase, large terminal subunit. | 0.559 |
SDC36736.1 | SDC36695.1 | SAMN05444679_102403 | SAMN05444679_102402 | GntR family transcriptional regulator, vanillate catabolism transcriptional regulator. | Vanillate demethylase subunit A. | 0.878 |
SDC36736.1 | SDC36764.1 | SAMN05444679_102403 | SAMN05444679_102404 | GntR family transcriptional regulator, vanillate catabolism transcriptional regulator. | Vanillate demethylase subunit B. | 0.811 |
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